Index

C

correlation() (in module mimeco.utils) create_ecosystem_metabolic_dict() (in module mimeco.utils)

crossfed_metabolites() (in module mimeco.analysis) crossfed_mets() (in module mimeco.utils)

E

enterocyte_crossfed_metabolites() (in module mimeco.analysis)

enterocyte_interaction_score_and_type() (in module mimeco.analysis) extract_sampling_data() (in module mimeco.utils)

F

find_namespace() (in module mimeco.utils)

I

infer_interaction_score() (in module mimeco.utils)

infer_interaction_type() (in module mimeco.utils) interaction_score_and_type() (in module mimeco.analysis)

M

mimeco.analysis module mimeco.utils module

mo_fba() (in module mimeco.utils) mocba_to_cobra() (in module mimeco.utils) module mimeco.analysis mimeco.utils

N

no_compartment_id() (in module mimeco.utils)

O

oppositeSigns() (in module mimeco.utils)

P

pareto_parsing() (in module mimeco.utils) pareto_plot() (in module mimeco.utils)

pareto_sampling() (in module mimeco.utils) plot_exchange() (in module mimeco.utils)

R

reac_to_met_id() (in module mimeco.utils)

restrain_medium() (in module mimeco.utils)

U

unrestrain_medium() (in module mimeco.utils)